A translator doesn’t know about pronounciation. If you type Alipio with the O in the end, it will output an O. Baybayin is spelled using sound. Since the name (at least what I was told) is that it’s pronounced at the end as Yo rather than a hard O. Just like Lea typed in the translator would display Le-a but it should be Le-Ya. You have to enter how it’s pronounced.
Kristian Kabuay 
Is this correct? When you go to Baybayin Translator on the home page it populates different script?
A translator doesn’t know about pronounciation. If you type Alipio with the O in the end, it will output an O. Baybayin is spelled using sound. Since the name (at least what I was told) is that it’s pronounced at the end as Yo rather than a hard O. Just like Lea typed in the translator would display Le-a but it should be Le-Ya. You have to enter how it’s pronounced.